Databionic ESOM Tools 1.0 API

Packages
databionics Base classes for all applications handling command line parsing and configuration file loading.
databionics.cli Extension of commons-cli with loading default values from config file.
databionics.esom The ESOM Tools command line programs and the ESOM Analyzer.
databionics.esom.cooling Provides strategies for cooling of a parameter, like the learning rate for SOM training.
databionics.esom.grid ESOM grids: A grid holds the prototype vector and defines the map space topology by the function findNeighbors.
databionics.esom.gui The basic GUI components of the ESOM Analyzer.
databionics.esom.gui.util Some GUI components of the ESOM Analyzer.
databionics.esom.neighborhood Provides neighborhood kernels for SOM training.
databionics.esom.renderer Global classes for visualization.
databionics.esom.renderer.background Background visualization methods that all inherit from BackgroundRenderer.
databionics.esom.renderer.foreground Foreground visualization methods that all inherit from ForegroundRenderer.
databionics.esom.tool  
databionics.esom.tool.bminfo  
databionics.esom.tool.classmask  
databionics.esom.tool.component  
databionics.esom.tool.data  
databionics.esom.tool.dataclass  
databionics.esom.tool.info  
databionics.esom.tool.island  
databionics.esom.tool.legend  
databionics.esom.tool.mapview  
databionics.esom.tool.options  
databionics.esom.tool.pointinfo  
databionics.esom.tool.projection  
databionics.esom.tool.similarity  
databionics.esom.tool.slideshow  
databionics.esom.train Implementation of training algorithms.
databionics.esom.train.search  
databionics.esom.util Some utility classes mainly for the GUI.
databionics.esom.util.actions Event handling mainly for menu of the ESOM Analyzer.
databionics.gui Useful GUI classes like a panel displaying log4j messages and a dialog for running programs based on an XML description of the parameters.
databionics.io Loading and saving of all file formats.
databionics.math Pairwise distance calculation and Pareto Density Estimation.
databionics.modules Description of program parameters loadable from XML files.
databionics.project Managing a collection of file types.
databionics.runner Helper class to run external tools (non-Java).
databionics.text Some simple string routines including n-gram similarity.
databionics.util Some utilities including searching for classes in a jar and reading an environment variable.

 



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